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ligand protein interaction software

Here, we present the protein–ligand interaction profiler (PLIP), a novel we...

📦 .zip⚖️ 60.7 MB📅 11 Nov 2025

Here, we present the protein–ligand interaction profiler (PLIP), a novel web interaction data for structures from PDB or external software is  ‎INTRODUCTION · ‎WEB SERVER DESCRIPTION · ‎PLIP ALGORITHM · ‎EXAMPLES.

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Welcome to Protein-Ligand Interaction Profiler (PLIP)!. Easy and fast ident...

📦 .zip⚖️ 96.5 MB📅 08 Apr 2026

Welcome to Protein-Ligand Interaction Profiler (PLIP)!. Easy and fast identification of noncovalent interactions between proteins and their ligands. PDB file: max.

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This is LigDig. a web application for investigating ligand-protein interact...

📦 .zip⚖️ 49.8 MB📅 20 Sep 2025

This is LigDig. a web application for investigating ligand-protein interactions. LigDig can be used to query structural and functional properties. Learn more.

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Software tools and databases to detect protein-ligand interactions....

📦 .zip⚖️ 21.9 MB📅 08 Nov 2025

Software tools and databases to detect protein-ligand interactions.

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LPIcom is a web server developed for understanding protein-ligand interacti...

📦 .zip⚖️ 29.6 MB📅 31 Oct 2025

LPIcom is a web server developed for understanding protein-ligand interaction for almost all ligands available in Protein Data Bank. It has three major modules.

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The Utrecht Biomolecular Interactions software portal provides access to so...

📦 .zip⚖️ 78.7 MB📅 11 Sep 2025

The Utrecht Biomolecular Interactions software portal provides access to software problems including protein-protein, protein-nucleic acids and protein-ligand.

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The following web utilities, databases and programs can help you in definin...

📦 .zip⚖️ 83.5 MB📅 23 Aug 2025

The following web utilities, databases and programs can help you in defining and analyzing the interactions between a small molecule (ligand).

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COACH is a meta-server approach to protein-ligand binding site prediction. ...

📦 .zip⚖️ 28.3 MB📅 28 May 2026

COACH is a meta-server approach to protein-ligand binding site prediction. for biologically relevant ligand-protein interactions, Nucleic Acids Research,

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Server: PoseView (dwn.220.v.ua) Free software: LigPlot+ Can anyone suggest ...

📦 .zip⚖️ 94.2 MB📅 29 Jan 2026

Server: PoseView (dwn.220.v.ua) Free software: LigPlot+ Can anyone suggest any server that shows the protein ligand interactions.

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Written by Andrew Wallace and Roman Laskowski. Automatically generates sche...

📦 .zip⚖️ 87.5 MB📅 12 Jan 2026

Written by Andrew Wallace and Roman Laskowski. Automatically generates schematic diagrams of protein-ligand interactions for a given PDB file. (Click on the.

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Each ligand must have at least 30 protein binding sites in PDB. Ligand-amin...

📦 .zip⚖️ 104.5 MB📅 03 Jan 2026

Each ligand must have at least 30 protein binding sites in PDB. Ligand-amino acid interaction analysis Two-sample logo Motif analysis .. This software stores the information of each ligand interacting residue with the.

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Binding pockets & pocket-ligand datasets Residue And Affinity for ident...

📦 .zip⚖️ 103.9 MB📅 02 Apr 2026

Binding pockets & pocket-ligand datasets Residue And Affinity for identifying protein–ligand fragment interaction, pathways and SNPs - . SMAP - SMAP software package is designed for the comparison and the similarity.

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Pales: PALES is a software for analysis of residual dipolar couplings. It a...

📦 .zip⚖️ 99.4 MB📅 14 Oct 2025

Pales: PALES is a software for analysis of residual dipolar couplings. It automatically generates schematic diagrams of protein-ligand interactions for a given.

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The number of protein-ligand docking programs currently available is high a...

📦 .zip⚖️ 76.8 MB📅 30 Oct 2025

The number of protein-ligand docking programs currently available is high and has been DARWIN, , The Wistar Institute, Prediction of the interaction between a protein and another biological molecule by genetic algorithm, No.

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Protein–ligand docking is a molecular modelling technique. The goal of prot...

📦 .zip⚖️ 108.1 MB📅 18 May 2026

Protein–ligand docking is a molecular modelling technique. The goal of protein–ligand docking Several protein–ligand docking software applications are available, such as A comprehensive ligand-protein interaction database on BioLiP.

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